dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000015_10|CGC1
Gene ID: MGYG000000015_03649
Location and strand information: 75373 - 76473 (+)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system permease protein LptF

Gene clsuter ID: MGYG000000015_10|CGC1
Gene ID: MGYG000000015_03650
Location and strand information: 76473 - 77555 (+)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system permease protein LptG

Gene clsuter ID: MGYG000000015_10|CGC1
Gene ID: MGYG000000015_03651
Location and strand information: 77691 - 80024 (+)
Family: PAS+HisKA+HATPase_c+Response_reg
Protein type: STP
Protein description: Aerobic respiration control sensor protein ArcB

Gene clsuter ID: MGYG000000015_10|CGC1
Gene ID: MGYG000000015_03652
Location and strand information: 80256 - 80909 (+)
Family: null
Protein type: null
Protein description: Glyoxalase ElbB

Gene clsuter ID: MGYG000000015_10|CGC1
Gene ID: MGYG000000015_03653
Location and strand information: 80906 - 81631 (+)
Family: GT51
Protein type: CAZyme
Protein description: Biosynthetic peptidoglycan transglycosylase
Protein isoelectric point: 10.5829
Protein molecular weight: 26942.27
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000015_10|CGC1
Gene ID: MGYG000000015_03654
Location and strand information: 81671 - 81943 (-)
Family: 8.A.8.1.5
Protein type: TC
Protein description: Phosphocarrier protein NPr

Gene clsuter ID: MGYG000000015_10|CGC1
Gene ID: MGYG000000015_03655
Location and strand information: 81940 - 82794 (-)
Family: null
Protein type: null
Protein description: RNase adapter protein RapZ

Gene clsuter ID: MGYG000000015_10|CGC1
Gene ID: MGYG000000015_03656
Location and strand information: 82840 - 83331 (-)
Family: 4.A.2.1.4
Protein type: TC
Protein description: Nitrogen regulatory protein

Gene clsuter ID: MGYG000000015_10|CGC1
Gene ID: MGYG000000015_03657
Location and strand information: 83414 - 83701 (-)
Family: null
Protein type: null
Protein description: Ribosome hibernation promoting factor

Gene clsuter ID: MGYG000000015_10|CGC1
Gene ID: MGYG000000015_03658
Location and strand information: 83724 - 85157 (-)
Family: null
Protein type: null
Protein description: RNA polymerase sigma-54 factor

Gene clsuter ID: MGYG000000015_10|CGC1
Gene ID: MGYG000000015_03659
Location and strand information: 85205 - 85930 (-)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system ATP-binding protein LptB

Gene clsuter ID: MGYG000000015_10|CGC1
Gene ID: MGYG000000015_03660
Location and strand information: 85937 - 86491 (-)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system protein LptA

Gene clsuter ID: MGYG000000015_10|CGC1
Gene ID: MGYG000000015_03661
Location and strand information: 86460 - 87035 (-)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system protein LptC

Gene clsuter ID: MGYG000000015_10|CGC1
Gene ID: MGYG000000015_03662
Location and strand information: 87032 - 87598 (-)
Family: null
Protein type: null
Protein description: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC

Gene clsuter ID: MGYG000000015_10|CGC1
Gene ID: MGYG000000015_03663
Location and strand information: 87613 - 88599 (-)
Family: SIS+CBS+CBS
Protein type: STP
Protein description: Arabinose 5-phosphate isomerase KdsD

Gene clsuter ID: MGYG000000015_10|CGC1
Gene ID: MGYG000000015_03664
Location and strand information: 88613 - 89590 (-)
Family: 2.A.19.5.1
Protein type: TC
Protein description: Inner membrane protein YrbG

Gene clsuter ID: MGYG000000015_10|CGC1
Gene ID: MGYG000000015_03665
Location and strand information: 89819 - 90631 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid import ATP-binding protein MlaF

Gene clsuter ID: MGYG000000015_10|CGC1
Gene ID: MGYG000000015_03666
Location and strand information: 90639 - 91421 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid ABC transporter permease protein MlaE

Gene clsuter ID: MGYG000000015_10|CGC1
Gene ID: MGYG000000015_03667
Location and strand information: 91426 - 91974 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid ABC transporter-binding protein MlaD

Gene clsuter ID: MGYG000000015_10|CGC1
Gene ID: MGYG000000015_03668
Location and strand information: 91993 - 92628 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid-binding protein MlaC

Gene clsuter ID: MGYG000000015_10|CGC1
Gene ID: MGYG000000015_03669
Location and strand information: 92628 - 92921 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid ABC transporter-binding protein MlaB

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CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000015_03649	Lipopolysaccharide export system permease protein LptF	TC	75373	76473	+	1.B.42.1.2
MGYG000000015_03650	Lipopolysaccharide export system permease protein LptG	TC	76473	77555	+	1.B.42.1.2
MGYG000000015_03651	Aerobic respiration control sensor protein ArcB	STP	77691	80024	+	PAS\| HisKA\| HATPase_c\| Response_reg
MGYG000000015_03652	Glyoxalase ElbB	null	80256	80909	+	No domain
MGYG000000015_03653	Biosynthetic peptidoglycan transglycosylase	CAZyme	80906	81631	+	GT51
MGYG000000015_03654	Phosphocarrier protein NPr	TC	81671	81943	-	8.A.8.1.5
MGYG000000015_03655	RNase adapter protein RapZ	null	81940	82794	-	ATP_bind_2
MGYG000000015_03656	Nitrogen regulatory protein	TC	82840	83331	-	4.A.2.1.4
MGYG000000015_03657	Ribosome hibernation promoting factor	null	83414	83701	-	Ribosomal_S30AE
MGYG000000015_03658	RNA polymerase sigma-54 factor	null	83724	85157	-	Sigma54_AID\| Sigma54_CBD\| Sigma54_DBD
MGYG000000015_03659	Lipopolysaccharide export system ATP-binding protein LptB	TC	85205	85930	-	1.B.42.1.2
MGYG000000015_03660	Lipopolysaccharide export system protein LptA	TC	85937	86491	-	1.B.42.1.2
MGYG000000015_03661	Lipopolysaccharide export system protein LptC	TC	86460	87035	-	1.B.42.1.2
MGYG000000015_03662	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC	null	87032	87598	-	Hydrolase_3
MGYG000000015_03663	Arabinose 5-phosphate isomerase KdsD	STP	87613	88599	-	SIS\| CBS\| CBS
MGYG000000015_03664	Inner membrane protein YrbG	TC	88613	89590	-	2.A.19.5.1
MGYG000000015_03665	putative phospholipid import ATP-binding protein MlaF	TC	89819	90631	+	3.A.1.27.3
MGYG000000015_03666	putative phospholipid ABC transporter permease protein MlaE	TC	90639	91421	+	3.A.1.27.3
MGYG000000015_03667	putative phospholipid ABC transporter-binding protein MlaD	TC	91426	91974	+	3.A.1.27.3
MGYG000000015_03668	putative phospholipid-binding protein MlaC	TC	91993	92628	+	3.A.1.27.3
MGYG000000015_03669	putative phospholipid ABC transporter-binding protein MlaB	TC	92628	92921	+	3.A.1.27.3
Protein ID	Protein Name	Type	Start	End	Strand	Signature